[Godzik Lab] [AIDA Server]

Automated Multiple-Domain Protein Structure Prediction by FFAS-3D and AIDA

Click 2013.May.17.22665.tar.gz to download the assembly result and individual domain structures.


  Domain Architechture

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570
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primarysequence        MKVFSTIVKLILLSAVMTVATTSCDSDIDPVYVLSGDSMELMGGPNEVILTPDNPQALALTVYWSGDGRLALSDTLLQAPVNVAEITIQFSKDEHFTAPLNIAVDKNIHSRQFLCEELNSLLDRLGYEANEKAPLWIRMRSALAANIAPEYSNVMEVLVQSYRIELVLAQVLDKDWKNTSMTLASPAEDGIYKGFMGVNGWENWWLREANNVMWGNLGEEGKTFYASSEDSHWNFWFPNPSGCYYTTVNTVEGWWSALHVASLSVSGDVTGEMAYNKQSNQWTLPVNLATQSTLTISVSGKGSLYNRETTDIGPAIEQTVAFGGNSQNLLFGESADNISVTMPAGENLLVLDLSNPLQFTIGIGEDVPQPEVSQYLYFSGITNWEGFDDYLTLYDEAGLCYGGAHWIDSEWGYRAYTEQAWEPAYNAADGSTDLSGTLILAESKDNIPAPAQGLYVMDFNMKSLTYELTQVQTVTFTGLNDNWSESPMTQSAENPEIFTAEFIKEKKSPWGVKVLINNNWNLFFGGGSGILHLKHSESSAGFDGDDELEIGKTYVLTVDLGHQTYSYSLK
secondarystructureCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEECCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEECCEEEEEEEHHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEEEEEEEEEEEEEEECCCCCCCCCEEECCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCEEEEEEEEEEEEEECCCCCEEEECCCCEEEEEEEEECCCEEEEEEEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCEEEEEEEECCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEC
confidencescore930567999999999999874303579984054179872244157618978799989279999706861000477742230145999999618988853899453342685452999999999839987731889999999731665403432299999999989868887406887653113345789809999970476431896169843432488885210157899763230389938999998588759999971798983588642442598449999983315436899922376432014566877740011003688621245788348862263599999778973499999067888772205897205799998762365407997399999967865838931167765310389998888608853899982248880999999827641669988799999968999899864248899199999999139984389999197243466677604424678757789995000370699999949942799949
Dom IDPDB hitZ-score
1.4fe9_A-103.000----------------------------------------FTAGKDASIVMDAATADSVEIAKLSSTTA---------EEGSKIAVNSLTLNENHTIPFSM----TEDHVFKVALAQLDSVTQEYKSRASVVRELKISINASASGEGIQLVGNEVSITLQPADGYYIVGDFTGWDGNSAQQMKKDALDENLYILEAEIESTSNFKIFPASAINGNDIDDGDDSGDNFVSWTNAGAINTALDGKIKISFDAFNYRFTVKD--------------------------------------------------------------------------------------------------------------NSAPTELYMTGSAYNWGTPAALVPVNGTKGTFWGIFYFAANDQVKFAPQANWGNDFGFVDAISQEKDLAGLSDEGGNLKVGIAGWYLVYVSVIGDDKVIEFEKYLMGDTSYNGWDAQLFTVPGTADGEFVSPAFLKDG---AVRICVNPKWKTEFIIFDGQIAYR-----GNGGDQAAVQGKTGQKVYLNFGNGTGRIE--
2.2lba_A-20.280                                                                                                                                                                                                                                                                   ----EMGRNCKIVTEVVQNGNDFTWTQHFPGGRTTTNSFT-IDKEADMETMGGR---KFKATVKMEGGKIVADFPNYHHTAEISGGKLVEISTSSGVVKRTSKKIA----                                                                                                                                                                                                         

  Assembled Model

Download Assembled Model

  2 Domain Structures on the 1st Level

Download Domain 1 Download Domain 2