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Query: 1qh3_A mol:protein length:260 PROTEIN (HYDROXYACYLGLUTATHIONE HYDROLASE), from PDB0516

Results of FFAS03 search in PDB0516
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNLKFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGETDPVTTMRAVRREKDQFKMPRDLast
1 -130.0001qh3_A mol:protein length:260 PROTEIN (HYDROXYACYLGLUTATHIONE HYDROLASE)  ali model  100  1MKVEVLPALTDNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGDDRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNLKFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGETDPVTTMRAVRREKDQFKMPRD 260
2 -108.0001xm8_A mol:protein length:254 glyoxalase II  ali model follow..  36  1MQIELVPCLKDNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRY-GAKVIGSADRIPGIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFP-----GSRAIFTGDTMFSLSCGKLFEGTPKQMLASL-QKITSLPDDTSIYCGHEYTLSNSKFALSLEPNNEVLQSYAAHVAELRSKKLPTIPTTVKMEKACNPFLRSSNTDIRRALRAADEAEALGIIRKAKDDF..... 254
3 -106.0002p18_A mol:protein length:311 Glyoxalase II  ali model follow..  35  23FSVTVVPTLKDNFSYLINDHTTHTLAAVDNADYKPILTYIEEHTYTFSTILSTHKHWDHSGGNAKLKAELEAVVVVGGADSIPAVTKPVREGDRVQVGDLSVEVIDAPCHTRGHVLYKVQHPQHNDGVALFTGDTMFIAGIGAFFEGDEKDMCRAMEKNDYALDKVTFIFPGHEYTSGFMTFSEKTFPDRASIQAQRAKYAAAVKTGDPSVPSSLAEEKRQNLFLRVADPAFVAKMNQGNAHALMMYLYNACD....... 305
4 -105.0002qed_A mol:protein length:258 Hydroxyacylglutathione hydrolase  ali model follow..  33  8MNLNSIPAFQDNYIWVLTND-EGRCVIVDPGEAAPVLKAIAEHKWMPEAIFLT----DHVGGVKELLQHFPQMTVYGPATQDKGATHLVGDGDTIRVLGEKFTLFATPGHTLGHVCYF-------SRPYLFCGDTLFSGGCGRLFEGTPSQMYQSL-MKINSLPDDTLICCAHEYTLANIKFALSILPHDSFINEYYRKVKELRVKKQMTLPVILKNERKINLFLRTEDIDLINEINKQQPEARFAWLRSKKDTF..... 254
5 -54.0004chl_A mol:protein length:238 PERSULFIDE DIOXYGENASE ETHE1, MITOCHONDRIAL  ali model follow..  22  17.........SCTFTYLLGDRESREAVLIDPVTAPRDAQLIKELGLRLLYAVNTHCHADHITGSGLLRSLLPGCQSVISRLSGAQADLHIEDGDSIRFGRFALETRASPGHTPGCVTFVL-----NDHSMAFTGDALLIRGCGRFQQGCAKTLYHSVHEKIFTLPGDCLIYPAHDYHGFTVSTVEEERTLNPRLTLSCEEFVKIMGNLNLPKPQQIDFAVPAN...................................... 228
6 -52.5002gcu_A mol:protein length:245 Putative hydroxyacylglutathione hydrolase 3  ali model follow..  24  13.........SSTFTYLLADHPDKPALLIDPVTVDRDLKLIDELGLKLIYAMNTHVHADHVTGTGLLKTKLPGVKSVISKASGSKADLFLEPGDKVSIGDIYLEVRATPGHTAGCVTYVTGEADQPQPRMAFTGDAVLIRGCGRFQEGSSDQLYESVHSQIFTLPKDTLIYPAHDYKGFEVSTVGEEMQHNPRLTKDKETFKTIMSNLNLSYPKMIDVAVPAN...................................... 232
7 -51.1004ysb_A mol:protein length:233 Metallo-beta-lactamase family protein  ali model follow..  29  11.........SSTYTYLIGDEATRQAVLIDPVQVDRDLQMVAELDLTLTHVFDTHVHADHITASGALRERT-QATVVGSVNGASCANVQVRHGDEVRVGQLVFQVLATPGHTDDSISYLLGD-------RVFTGDALLVRGNGRFQNGNASQLYDSLTRVLFTLPDETLVYPGHDY--------------------------------KGRTVTSIAEEKRHNPRVAGKSREIMENLNLPRPKLIDAAVPANRACGHTAPS 229
8 -44.0002zwr_A mol:protein length:207 Metallo-beta-lactamase superfamily protein  ali model follow..  26  3VFPVTLGPLQEN-AYLVET--GEGPVLIDPGEPEKLLALFQTTGLIPLAILLTHAHFDHVGAVAPLVEAL-DLPVYLHPLDLPLYEGADLAARAWGLAIFGFQVLHLPGHSPGHVAFYDP-----EGAQVFSGDLLFRGSVGRLPGADPKALFASL-KRLLSLPPETRVHPGH--------------------------------------GTTLGLEARTNPFLT.................................. 201
9 -42.0002xf4_A mol:protein length:210 HYDROXYACYLGLUTATHIONE HYDROLASE  ali model follow..  25  3YRIIPVTAFSQN-CSLIWCEQTRLAALVDPGDAEKIKQEVDASGVTLMQILLTHGHLDHVGAASELAQHY-GVPVIGPEKQPLTPDRWLNDGDRVSVGNVTLQVLHCPGHTPGHVVFF-----DEQSQLLISGDVIFKGGVGRFPRGDHTQLIDAIKRKLLPLGDDVTFIPGH--------------------------------------LSTLGYERLHNPFLQ.................................. 209
10 -34.0004efz_A mol:protein length:298 Metallo-beta-lactamase family protein  ali model follow..  24  15.........TCTISYLLFDSGSGECALIDSVSADQLIARVAALGARVRWLLETHVHADHLSAAPYLKTRVGGEIAIGRHVTRSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEAHDARDAAAFVGDTLFMPDYGTFPGGDARSLYRSIRKVL-SLPPATRLYMCHDYQPNGRAIQYA---------------------------STVADELRENVHIREGVTE-----------DDFVAMRTARDA...... 259
11 -33.8002q0j_A mol:protein length:321 Quinolone signal response protein  ali model follow..  18  38.............VFLLRLGEAS-WALVEGGDAELVWADLCRWVAQVHYWLITHKHYDHCGLLPYLCPRLPNVQVLASERTCQAWKRAVADGEWLELGPHRLQVIEAHGHSDDHVVFY-----DVRRRRLFCGDALFDEAEGVWRPLVFDDMEAYLEERLQRLPTLLQLIPGHGGLLRGRLAADGAESAYTECLRLCRRLLWRQSMGE-------SLDELSEELHRAWGGQSVDFLPGELHLGSMRRMLEILSRQALPLD 315
12 -33.7003tp9_A mol:protein length:474 BETA-LACTAMASE and RHODANESE DOMAIN PROTEIN  ali model follow..  19  16...........HASYLVGCQETGEACVIDPADVEPYLLTAKREGLRIVAALETHIHADFVSGAREMADRAGAAICVSDEGPPE--HRLLKDGDELHFGNVRIVVMHTPGHTPEHVSYLLYDGKTSPDVALFSGDFVFVGDVGR--EALARQMFRSL-RKFEALPDHVQVLPAH----AGSACGKALGAVPS---------------------STVGYEKLVNWALQHKDEDVQALLAGQPEAPIYFARMKLVNK...... 258
13 -33.6004ysk_A mol:protein length:294 Beta-lactamase domain protein  ali model follow..  21  17.........TSTISYLVMDRETRQCALIDSVSADRLVERVNELNASVRWVLETHVHADHLSAAAYLKEKLGGHTAIGAHITQSQFDVLLEDEEGFRIGNLQARALHTPGHTPACMSFMIED---AGEIAVFVGDTLFMPDYGTFPGADARTLYRSIRRLL-AFPDQTRLFMCHDYLPGGRDMQYV---------------------------TTVAEQRASNIHIHQGIDE-----------DSFVAMREARDK...... 255
14 -33.6003r2u_A mol:protein length:466 Metallo-beta-lactamase family protein  ali model follow..  22  31...........QASYLIGCQKTGEAMIIDPIDLSSYIRVADEEGLTITHAAETHIHADFASGIRDVAIKLNANIYVSGEKNMPNHTHFVQHNDDIYVGNIKLKVLHTPGHTPESISFLLTDEGAGAPMGLFSGDFIFVGDIGR--EIGAKQMFKSI-ESIKDLPDYIQIWPGH----AGSPCGKSLGAIPT---------------------STLGYEKQTNWAFSENNEAIDKLISDQPAPPHHFAQMKKINQ...... 272
15 -31.9003adr_A mol:protein length:261 Putative uncharacterized protein ST1585  ali model follow..  21  22.............VYVMCGE--KLTVMIDAGVSNSIADFSFLD--KLDYIVLTHLHIDHIGLLPELLQV-YKAKVLVKSGFKKYLTSEVEGNEEFDLGGYRMRLIYTPGHARHHMSVLVDD-------FLFTGDSAGAYFNGVVIPTTPKMYMESL-KRQIELKPKV-VGFAH....................................................................................... 207
16 -30.8003vpe_A mol:protein length:262 Metallo-beta-lactamase  ali model follow..  20  9..QQPFTIYGNTHAVLLSSPQG--HILVDGTGAQVVAANIRAMGFKVKYILSTHSHEDHAGGISAMQKLT-GATVLAGAANVDTLVRAVADGELVKLGPLAVKAHATPGHTEGGITWTWQSCEQGKCKDVVFADSLTAVSADSYRFSDHPEVVASLRGSFEAV-SCDIAIAAHPEVNDMWTRQQRAAKEGNSAYVDNGACRAIAAAGRKRLETRLASEKR........................................ 262
17 -30.7001jt1_A mol:protein length:263 FEZ-1, class B3 metallo-beta-lactamase  ali model follow..  15  8..FPPFRIAGNLYSYLIVTPRG--NILINEANVPMIKASIKKLGFKTKILLISHAHFDHAAGSELIKQQT-KAKYMVMDEDVSVIDKVLHDGERVELGGTVLTAHLTPGHTRGCTTWTMKLKDHGK-----QYQAVIIGSIGVNYPKIAEDYKHSI-KVLESMRCDIFL-GSHAGMFDLKNKYVLLSKGQNNPFVDPTGCKNYIEQKANDFYTELKKQET........................................ 262
18 -30.6005aeb_A mol:protein length:272 LRA-12  ali model follow..  16  21..YRPFRIAGNLYCYLITTKQGNIIVNTGLAASALIKNNIKALGFKTKILLTTQAHYDHLGAMAEIKKIT-GAKLMADEGDATVMDRLLHDKDTIQLGDTKLVMLHHPGHTKGSCSFLFDTKDEQR-----SYRILIANMPTIVIEGIAKDYAYTL-QAMKNLSFDI-WVASHASQFSMHSKHKPGDGYNPKSFMDRKGYDESLDKLQKEYEKHLNEN.......................................... 272
19 -30.2004f6h_A mol:protein length:236 Beta-lactamase  ali model follow..  14  31........VPKHGLVVLVNAE---AYLIDAKDTEKLVTWFVERGYKIKGSISSHFHSDSTGGIEWLNSR--SIPTYASELTNELLKKDSFSGVNYWLVKNKIEVFYPPGHTPDNVVVWLP-----ERKILFGGGFIKPYGLGNLGDANIEAWPKSAKLLKSKYGKAKLVVPSHSEVGDASLLKLTLEQAVKGLNESKKPSKPSNWSHPQ................................................... 233
20 -30.2003lvz_A mol:protein length:294 Blr6230 protein  ali model follow..  17  38..FEPFQLIDNIYVYVIKTSQG--LILMDTASTGMIKDNIAKLGFKIKLILNTHAHLDHTGGFAEIKKET-GAQLVAGERDKPLLDRAVKEGDRVTLGDTTLTAHATPGHSPGCTSWEMTVKDGKE-----DREVLFFCSGT--YAGIVDDYRATF-AKAKAMKIDVLL-GPHPEVYGMQAKRAEMKDGAPNPFIKPGELVTYATSLSEDFDKQLAKQTA........................................ 289
21 -29.9004p62_A mol:protein length:295 Metallo-beta-lactamase AIM-1  ali model follow..  19  41..AMPQKVYGNTWALLVTSDAG--HILVDPQAGPQILANIRALGFRVRAIVLSHEHFDHAGSLAELQKAT-GAPVYARAPAIDTLIVTLADDGVVSVGPLALTAVASPGHTPGGTSWTWRSCEGDDCRQMVYADSLTAIS--AAHPGYLAAFRNTL-ARVAALDCDILV-TPH--SASGLWNRIGPRAAAPLMDT--TACRRYAQGARQRLEKRLAEEAA........................................ 294
22 -29.7004ubq_A mol:protein length:229 Beta-lactamase  ali model follow..  14  32........VSKHGLVVLVNTD---AYLIDATDTEKLVNWFVERGYKIKGTISSHFHSDSTGGIEWLNSQ--SIPTYASELTNELLKKDSFSGVSYWLVKNKIEVFYPPGHTQDNVVVWLPEKK-----ILFGGCFVKPDGLGNLGDANLEAWPKSAKILMSKYVKAKLVVSSH----SEIGDASLLKRTWEQAVKGLNESKKPSQPS..................................................... 228
23 -29.5004wd6_A mol:protein length:233 Metallo-beta-lactamase  ali model follow..  15  31........VSSNGLVVI---DKGNAFIVDDRDTETLVHWIRKNGYELLGSVSTHWHEDRTAGIKWLNDQ--SISTYATTSTNHLLAKYTLKGNESTLVDGLIEVFYPGGHTIDNVVVWLPKSK-----ILFGGCFVRSLDLGYTGEAHIDQWSRSAQNALSRYSEAQIVIPGH----GKIGDIALLKHTKSLAETASNKSIQPNANASA................................................... 232
24 -29.4004awy_B mol:protein length:303 METALLO-BETA-LACTAMASE AIM-1  ali model follow..  20  41..AMPLKVYGNTWALLVTSDAG--HILVDPQAGPQILANIRALGFRVRAIVFSHEHFDHAGSLAELQKAT-GAPVYARAPAIDTLIVTLADDGVVSVGPLALTAVASPGHTPGGTSWTWRSCEGDDCRQMVYADSLTAIS--AAHPGYLAAFRNTL-ARVAALDCDILV-TPHPSAMDTTACRRYAQGARQRLEKRLAEEAATSPSS..................................................... 299
25 -29.3005iqk_A mol:protein length:271 beta-lactamase Rm3  ali model follow..  16  14..QAPFRLFGNTYSVLVTSPQG--HVLIDGGSAPKIIANIGALGFRVKLILNSHGHIDHAGGLAELQRRS-NALVAASPSAALDLMRLARDGGQFNVGPVYLTAHATPGHTPGGLSWTWQSCDGPR-----CLNMVYADSINAVYPNALADLRHSF-ETLEKLPCDVLI-SAHPEASQLWQRLEASATGGSDAFVDPQACRAYVAAARTLLDSRLDQEKQ........................................ 270
26 -29.1001sml_A mol:protein length:269 PROTEIN (PENICILLINASE)  ali model follow..  19  40.............ALLVQTPDG--AVLLDPQMASHLLDNMKARGVTLRLILLSHAHADHAGPVAELKRRT-GAKVAANAESAVLLDRIVMDGEVITVGGIVFTAHFMAGHTPGSTAWTWTDTRNGKPVRIAYADSLSAPGYQLQYPHLIEDYRRSF-ATVRALPCDVLL-TPHRAGAKALTCKAYADAAEQKFDGQLAKETAGAR....................................................... 269
27 -28.3002p97_A mol:protein length:201 Hypothetical protein  ali model follow..  15  23..........DFNGFAWIRPEG--NILIDPVALSNHDWKHLESLGGVVWIVLTNS--DHVRSAKEIADQT-YTKIAGPVAEKENFDRWLSDGDELVPG---LKVMELQGKTPGELALLLEE------TTLITGDLVRAYRAGGL--MNKQKVVASV-RRLAALEKVEAVLVGD....................................................................................... 181
28 -28.3004ad9_A mol:protein length:289 BETA-LACTAMASE-LIKE PROTEIN 2  ali model follow..  15  28.......TLQGTNTYLV--GTGPRRILIDTGEPSCLKQALTEFNTAIQEIVVTHWHRDHSGGIGDICKSINNDTTYEIIGNGEQQYVYLKDGDVIKTEGATLRVLYTPGHTDDHMALLLE-----EENAIFSGDCIL---------GEGTTVFEDLYDYMNSLKKADIIYPGH---------GPVIHNAEAKIQQYISHRNIREQQILTLFRENFEKSFTVMELVKIIYKNTPENLHEMAKHNLLLHLKKLEKEGKIFSN 278
29 -27.4002ynt_B mol:protein length:233 GIM-1 PROTEIN  ali model follow..  12  31........VDSNGLVVLDNNQ---AYIIDEEDTKLLLSWATDRGYQVMASISTHSHEDRTAGIKLLNSK--SIPTYTSELTKKLLAREYFKDDEFTLGNGLIELYYPAGHTEDNIVAWLPKSK-----ILFGGCLVRSHELGYVGDASISSWADSIKNIVSKKYPIQMVVPGH----GKVGSSDILDHTIDLAESASNKLMQPTAEASA................................................... 232
30 -26.7005a87_A mol:protein length:248 METALLO-BETA-LACTAMASE VIM-5  ali model follow..  17  49........YPSNGLIVRDGDE---LLLIDAKNTAALLAEIEKQGLPVTRAVSTHFHDDRVGGVDVLRKA--GVATYGNEIPTHSLEGLSSSGDAVRFGPVELFYPG-AAHSTDNLVVYVPSAN-----VLYGGCAVLALSAGNVADADLAEWPTSVERIQKHYPEAEVVIPGHQHTANVVTAHKN........................................................................... 243
31 -26.5005acp_A mol:protein length:250 GIM-1 PROTEIN  ali model follow..  12  48........VDSNGLVVLDNNQ---AYIIDEEDTKLLLSWATDRGYQVMASISTHSHEDRTAGIKLLNSK--SIPTYTSELTKKLLAREYFKDDEFTLGNGLIELYYPAGHTEDNIVAWLP-----KSKILFGGCLVRSHGLGYVGDASISSWADSIKNIVSKKYPIQMVVPGH----GKVGSSDILDHTIDLAESASNKLMQPTAEASA................................................... 249
32 -26.3002nze_A mol:protein length:222 Beta-lactamase II  ali model follow..  17  34........VPSNGLVLNTSKG---LVLVDDKLTKELIEMVEKKQKRVTDVIITHAHADHIGGIKTLKER--GIKAHSKKNGYEEPLGDLQTVTNLKFGNMKVETFYPKGHTEDNIVVWLPQYN-----ILVGGSLVKSTSLGNVADAYVNEWSTSIENVLKRYRNINAVVPGHGEVGDKGLLLHTLD......................................................................... 219
33 -26.2004uwo_B mol:protein length:266 METALLO-BETA-LACTAMASE VIM-26  ali model follow..  17  67........YPSNGLIVRDGDE---LLLIDTANTAALLAEIEKQGLPVTRAVSTHFHDDRVGGVDVLRAA--GVATYGNEIPTHSLEGLSSSGDAVRFGPVELFYPG-AAHSTDNLVVYVPSAN-----VLYGGCAVLELSAGNVADADLAEWPTSVERIQKHYPEAEVVIPGHQHTANVVKAHKN........................................................................... 261
34 -26.2001znb_A mol:protein length:232 METALLO-BETA-LACTAMASE  ali model follow..  19  35........VPSNGMIVINNHQ---AALLDDAQTETLVNWVADSHAKVTTFIPNHWHGDCIGGLGYLQKK--GVQSYANEKGLPVPEHGFTDSLTVSLDGMPLQCYYLGGHATDNIVVWLPTEN-----ILFGGCMLKDNQIGNISDADVTAWPKTLDKVKAKFPSARYVVPGH----GDYGGTELIEHTKQIVNQYIESTSK.......................................................... 231
35 -26.1001a7t_A mol:protein length:232 METALLO-BETA-LACTAMASE  ali model follow..  19  35........VPSNGMIVINNHQ---AALLDDAQTEMLVNWVTDSHAKVTTFIPNHWHGDCIGGLGYLQRK--GVQSYANEKGLPVPEHGFTDSLTVSLDGMPLQCYYLGGHATDNIVVWLPTEN-----ILFGGCMLKDNQIGNISDADVTAWPKTLDKVKAKFPSARYVVPGH----GNYGGTELIEHTKQIVNQYIESTSK.......................................................... 231
36 -26.0002y87_A mol:protein length:265 METALLO-B-LACTAMASE  ali model follow..  16  66........YSSNGLIVRDADE---LLLIDAKNTVALLAEIEKQGLPVTRSISTHFHDDRVGGVDVLRAA--GVATYGNEVPAHSLKALSSSGDVVRFGPVEVFYPG-AAHSGDNLVVYVPAVR-----VLFGGCAVHEASAGNVADANLAEWPATIKRIQQRYPEAEVVIPGH----GLPGGLELLQHTTNVVKTHKVRPVAE......................................................... 265
37 -25.9002yz3_A mol:protein length:266 Metallo-beta-lactamase  ali model follow..  17  67........YPSNGLIVRDGDE---LLLIDTANTAALLAEIEKQGLPVTRAVSTHFHDDRVGGVDVLRAA--GVATYGNEIPTHSLEGLSSSGDAVRFGPVELFYPG-AAHSTDNLVVYVP-----SASVLYGGCAIYELSAGNVADADLAEWPTSIERIQQHYPEAQFVIPGHKHTTNVVKAHTN........................................................................... 261
38 -25.8002uyx_A mol:protein length:228 BETA-LACTAMASE II  ali model follow..  19  40........VPSNGLVLNTSKG---LVLVDDKLTKELIEMVEKKQKRVTDVIITHAHASRIGGIKTLKER--GIKAHSTKNGYEEPLGDLQTVTNLKFGNMKVETFYPKGHTEDNIVVWLPQYN-----ILVGGCLVKSTSLGNVADAYVNEWSTSIENVLKRYRNINAVVPGHLHTLDLLK............................................................................... 228
39 -25.6003fcz_A mol:protein length:222 Beta-lactamase 2  ali model follow..  15  34........VPSSGLVLNTSKG---LVLVDDKLTKELIEMVEKKQKRVTDAIITHAHADRIGGIKTLKER--GIKAHSTKNGYEEPLGDLQTVTNLKFGNMKVETFYPKGHTEDNIVVWLPQYN-----ILVGGCLVKSTSLGNVADAYVNEWSTSIENVSKRYRNINAVVPSHGEVGDKGLLLHTLD......................................................................... 219
40 -25.6003l6n_A mol:protein length:219 metallo-beta-lactamase  ali model follow..  21  29........YSANSMYLVTKKG---VVLFDKVQYQSLMDTIKKHNLPVVAVFATHSHDDRAGDLSFFNNK--GIKTYATAKTNEFLTEIIKTGKPYRIGGEEFVVDFLEGHTADNVVVWFPKYN-----VLDGGCLVKSNSAGYIKEANVEQWPKTINKLKAKYSKATLIIPGH----DEWKGGGHVEHTLELLNKK................................................................ 219
41 -25.0001ztc_A mol:protein length:221 hypothetical protein TM0894  ali model follow..  17  31.............VVYL--EHKDRRIIIDPGSMDELEEKFSELGISITDVLFTHVHLDHIFN----SVLFENATFYVHEKVISSWKNVVLLKGEESLFDEKVKVFHTPWHAREHLSFLLDTENAGR--VLITGDITPNR---SYYDIIKGYGSVQVKNFLDRVGRIDLLVFPHD...................................................................................... 206
42 -24.9001m2x_A mol:protein length:223 class B carbapenemase BlaB-1  ali model follow..  20  25........YAANAVYLVTDKG---VVVIDEDKFKSFTDEIYKHGKKVIMNIATHSHDDRAGGLEYFGKI--GAKTYSAKENKPRAQYTFDNNKSFKVGKSEFQVYYPKGHTADNVVVWFPKEK-----VLVGGCIIKSADSGYIGEAYVNDWTQSVHNIQQKFSGAQYVVAGH----DDWKDQRSIQHTLDLINEYQQKQKA.......................................................... 221
43 -24.0003spu_A mol:protein length:265 Beta-lactamase NDM-1  ali model follow..  12  47........VASNGLIVRDGGR---VLVVDDDQTAQILNWIKQENLPVALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLANGWVEPATAPNFGPLKVFYPG-PGHTSDNITVGID-----GTDIAFGGCLIKDSKAGNLGDADTEHYAASARAFGAAFPKASMIVMSH----SAPDSRAAITHTARMADKLRKLVPRGSAAAAL................................................... 256
44 -24.0004gyq_A mol:protein length:243 Beta-lactamase NDM-1  ali model follow..  15  46........VASNGLIVRDGGR---VLVVDDDQTAQILNWIKQENLPVALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLANGWVEPATAPNFGPLKVFYPG-PGHTSDNITVGID-----GTDIAFGGCLIKDSKAGNLGAADTEHYAASARAFGAAFPKASMIVMSHTHTARMAD............................................................................... 240
45 -23.8004exs_B mol:protein length:272 Beta-lactamase NDM-1  ali model follow..  16  73........VASNGLIVRDGGR---VLVVDDDQTAQILNWIKQENLPVALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLANGWVEPATAPNFGPLKVFYPG-PGHTSDNITVGID-----GTDIAFGGCLIKDSKAGNLGDADTEHYAASARAFGAAFPKASMIVMSHTHTARMADKLRLV.......................................................................... 272
46 -23.6004rl2_A mol:protein length:246 Beta-lactamase NDM-1  ali model follow..  15  49........VASNGLIVRDGGR---VLVVDDDQTAQILNWIKQENLPVALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLANGWVEPATAPNFGPLKVFYPG-PGHTSDNITVGID-----GTDIAFGGCLIKDSKAGNLGDADTEHYAASARAFGAAFPKASMIVMSHTHTARMAD............................................................................... 243
47 -23.6005a5z_A mol:protein length:251 BETA-LACTAMASE NDM-1  ali model follow..  15  46........VASNGLIVRDGGR---VLVVDDDQTAQILNWIKQENLPVALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLANGWVEPATAPNFGPLKVFYPG-PGHTSDNITVGID-----GTDIAFGGCLIKDSKAGNLGDADTEHYAASARAFGAAFPKASMIVMSHTHTARMADKLRL........................................................................... 244
48 -23.5004bp0_A mol:protein length:250 METALLO-B-LACTAMASE  ali model follow..  13  34..........SNVLVAKMLD--GTVVIVSSPFENLGTQTLKTMKPKKVVAINTHFHLDGTGGNEIYKKM--GAETWSSDLTKQLRVFDLKQGKVFSFSNELVEVSFPPAHSPDNVVVYFP-----KKKLLFGGCMIKPKELGYLGDANVKAWPDSA-RRLKKFDAKIVI-PGH----GEWGGPEMVNKTIKVAEKAVGEMR........................................................... 249
49 -23.4003rkk_A mol:protein length:237 Beta-lactamase NDM-1  ali model follow..  15  40........VASNGLIVRDGGR---VLVVDDDQTAQILNWIKQENLPVALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLANGWVEPATAPNFGPLKVFYPG-PGHTSDNITVGID-----GTDIAFGGCLIKDSKAGNLGDADTEHYAASARAFGAAFPKASMIVMSHTHTARMAD............................................................................... 234
50 -23.3004tyf_A mol:protein length:231 NDM-4  ali model follow..  15  34........VASNGLIVRDGGR---VLVVDDDQTAQILNWIKQENLPVALAVVTHAHQDKMGGMDALHAA--GIATYANALSNQLANGWVEPATAPNFGPLKVFYPG-PGHTSDNITVGID-----GTDIAFGGCLIKDSKAGNLGDADTEHYAASARAFGAAFPKASMIVMSHTHTARMAD............................................................................... 228
51 -22.6002zo4_A mol:protein length:317 Metallo-beta-lactamase family protein  ali model follow..  16  13...VPIPPLKTVNLYLLQGAGE--VALVDTALGTRHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEGLGARVFLTRERVHPPQNPLPLRDGEALEVAGKRLRVLWTPGHADGHAAFY-----LEEEGVLLAGDALLEK---GLWAYTRENPLKDFLRSLDRLAGARVAYAGHFGPIADVR-------------QRAEELKAHHQARLEALLALLDGPKAWELSLHLFPQELDPAGRRFAFAETLAHLEYLREEGAVGRG 308
52 -21.5001x8h_A mol:protein length:228 Beta-lactamase  ali model follow..  18  22.........QENSMVYFGAKG---VTVVGPDTARELHKLIKRSRKPVLEVINTNYHTDRAGGNAYWKSI--GAKVVSTRQTRDLMNVVHDGDFTLQEGKVRAFYAG-PAHTPDGIFVYFP-----DEQVLYGGCILKE-KLGNLSFADVKAYPQTLERLKAMKLPIKTVIGGHDSPLHGPELIDHYEALIKAAPQS................................................................ 227
53 -21.5004v0h_A mol:protein length:266 METALLO-BETA-LACTAMASE DOMAIN-CONTAINING PROT  ali model follow..  20  69............EAALEEAA--RGPILVDTGAREALLGALAGQGVDVTLVVGTHGHSDHIGNL----GLFPGAALLVSHDFCRYLPHGLGEGQPLRLGP-GLEVWATPGHGGQRDVSVVVAGTALGT-VVVAGDVFERDGDEDSWQALSEDPAAQERSRKRVLVVADVVVPGHG...................................................................................... 232
54 -21.2003q6v_A mol:protein length:233 Beta-lactamase  ali model follow..  17  24........VQENSMVYIGTDG---ITIIGPETAETLYKEIRKSPLPINEVINTNYHTDRAGGNAYWKTL--GAKIVATQMTYDLQKSQWGSPGDFNLQNGSIRAMYLEAHTKDGIFVYFP-----AERVLYGNCILK-ENLGNMSFANRTEYPKTLEKLKGLIEKVDSIIAGHDTPIHDVG............................................................................... 219
55 -20.7005i0p_A mol:protein length:366 Beta-lactamase domain protein  ali model follow..  15  36...MPLPSLDHINLWLLRDEIDGQATIVDCGISSEAIRTHWEQIFDVLRVLVTHCHPDHFGLANWLCEGGDNVRLWMTLPAVPPRYRRLREGDAVKIGARTWRVVTGYGHSPEHCALH-----SEADGVLISGDMVLPRISTNV-EANPLALYLESLGRYETMAPDTLVLPSHGKPFRGVRIAQLRAHHDARLEEVRVACAEKPMSAAGIVPIMFRRRELDIHQMTF---ALGEALAHLNLLWLAGELVREHGD...... 351
56 -19.2003dha_A mol:protein length:254 N-Acyl Homoserine Lactone Hydrolase  ali model follow..  19  43.......LLETEEGPILVDTGMPESAVNNEGEEDRIVNILKRVGYELLYIISSHLHFDHAGG----NGAFTNTPIIVQRTEYPHLNYKIIEGDYEVVPG--VQLLYTPGHSPGHQSLFIETEQSG--SVLLTIDASYTKE----FEDEVPFAGFDPELALSSIKEKPIIFFGHD...................................................................................... 240
57 -19.1002br6_A mol:protein length:252 AIIA-LIKE PROTEIN  ali model follow..  19  41.......LLETEEGPILVDTGMPESAVNNEGEEDRIVNILKRVGYELLYIISSHLHFDHAGG----NGAFTNTPIIVQRTEYPHLNYKIIEGDYEVVPG--VQLLYTPGHSPGHQSLFIKTEQSG--SVLLTIDASYTKE----FEDEVPFAGFDPELALSSIKEKPIIFFGHD...................................................................................... 238
58 -18.4003aj3_A mol:protein length:274 4-pyridoxolactonase  ali model follow..  17  39.......LIEHAEGRFLIDTGYDYDHVMKVEKHQTIPGALGLLGLEIDVVVNSHFHFDHCGGN----KYFPHAKKICHRSEVPQACNPGIDGDVDLARG--VKLISTPGHSIGHYSLLVEFPRRK--PILFTIDAAYTQK----FHIDPVAGVNSMRKVKKAEDHGAELMYSHD...................................................................................... 253
59 -18.3002r2d_A mol:protein length:276 Zn-dependent hydrolases  ali model follow..  13  47.......LIQCTDATVLYDTGCHPECMGTNGSECNLPERLRQLGLSISTVVLSHLHNDHAGC----VEYFGKSRLIAHEDEFATAVRYFADERERELAPGVNLLNFGTGHASGMLGLAVRLEKQP--GFLLVSDACYTAT--AGVLHDTIGYDRTV-SHIRQYAESLTVLFGHD...................................................................................... 260
60 -16.4003esh_A mol:protein length:280 Protein similar to metal-dependent hydrolase  ali model follow..  14  51................ILIQTAQYNLIIDAGEESHIIADLANYNLDIDYVLMTHMHFDHAAGLTD-HAIFENAIHVVQQDEYSNKLILFEKHFEPVPG---IKMQHSGGHSFGHTIITI---ESQGDKAVHMGDIFPTTA----YDDYPMQSIREKERMIPFIQQQYWFLFYHD...................................................................................... 252
61 -16.2004xuk_A mol:protein length:291 Putative hydrolase  ali model follow..  17  70...............ILIDSGAASCFGSHLGSVLSNLKASGYQPEQVDTILLTHLHPDHVCGISK-VANFPNATVYGTVEKIKQAIAPYQAKQRFKTYK-GFKVINTAGHTPGHFSYEL---KTKGESIVFIGDIVHSHTVQ--YDIDPKKAVETRLKQFANFAKNGQTIAAPHLPFPGIGHTYSADGKS...................................................................... 281
62 -15.4004zo2_A mol:protein length:294 Acylhomoserine lactonase  ali model follow..  14  71...............ILMDTGMGIFADERTGFLLKSLQKAGFSAHDITDIFLSHAHPDHIGGVVD-KLVFPNASIFISKKAIQPKLKFYDLNKTLYSH---FNFQLAPGHTPGLTVTTI---SSGNEKLMYVADLIHSDVIL--GDTDLDIATASRKKFLKQLADTKARAFTSHLPWPGLGFTKV........................................................................... 280
63 -14.6004le6_A mol:protein length:324 Organophosphorus hydrolase  ali model follow..  19  101...............VLIDTGAAQCFGPTLGVVQTNLKASGYQPEQVDTVLLTHLHPDHACGLVN-SPAYPNATVEVPQAEAENKLKPYKTEGELLPG---VSLVASPGHTPGHTSYLF---KSGGQSLLVWGDILLNHAVQ--FDVDSDQARQSRQRILAEAATDKLWVAGAHLPFPGLGHVRKEAQGYAWVPVEFSPIRSDR........................................................ 324
64 -14.4004o98_A mol:protein length:337 organophosphorus hydrolase  ali model follow..  18  91.............AYLI--NTGDNLVLIDTGAAQVVQTNLKASGYQVDTVLLTHLHPDHACGLVN-SPAYPNATVEVPQAEAENKLKPYKTEGELLPG---VSLVASSGHTPGHTSYLF---KSGGQSLLVWGDILINHAVQ--FDVDSDQARQSRQRILAEAATDKLWVAGAHLPFPGLGHVREEAQGYAWVPVEFSPIRSDRKLAAAL.................................................. 330
65 -14.3003kl7_A mol:protein length:235 Putative metal-dependent hydrolase  ali model follow..  13  37...................TYDNHSIQVDPVSEYADYTTFPKADI----ILITHEHGDHLDPKAIQAVEKSDTEIIANENKLGKGKVLKNGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGGLRVYIAGDTEDIPEMKDLKDNQPYTMTVSQAAKAARMFSPKILYPYHYGDTKIGELKDALKDSGIDVR.................................................................. 224
66 -14.2003g1p_A mol:protein length:258 Protein phnP  ali model follow..  15  35..................YRRQPCSGVVKFNDAITLIDADRWSPGSFQQFLLTHYHMDHVQGLFPLRGVGDPIPVYGPPDELLDFSHTVEPFVVFDLQGLQVTPLPL--HSKLTFGYLLETAH---------SRVAWLSDTAGLPEKTLKFLRNNQPQVMCSHPPRADAPRNHCDLNTVLALNQVIRSPRVILTHISHQFDAWLMENA--LPSGF............................................. 240
67 -14.2001p9e_A mol:protein length:331 Methyl Parathion Hydrolase  ali model follow..  17  99.............GYLV--NTGSKLVLVDTGAAGRLAANLKAAGYQVDEIYITHMHPDHVGGLMV-QLAFPNAVVRADQKEADGKFKPFSGNTDLVPG---IKALASHGHTPGHTTYVV---ESQGQKLALLGDLILVAAVQ--LDSDSKSVAVERKKAFADAAKGGYLIAASHLSFPGIGHIRA........................................................................... 313
68 -13.7004fek_A mol:protein length:262 Putative diflavin flavoprotein A 5  ali model follow..  16  45.............SYVIEGDKT---AIIDPPVESFMKIYLEALQ-KLDYVILGHFSPNRIPTFKALLELAPQITFVCSLPAAGDLRAPMRGKETLDLGGHVLKFLPIP-RWPAGLCTY-----DVQTQILYTDKIF----------GAHICGDDVFDDNWESFKEDQRYY-----------FNCLMAPHAIHVEAALEKISDLQVRLYAVGHGPLVRT.......................................... 237
69 -13.4002q9u_A mol:protein length:414 A-type flavoprotein  ali model follow..  11  43.............SYFIDDECPTVIDSVKYPFAEEWLSRIAAPLDKIKYVVMNHAEGDHASSLKDHYHKFTNATFVCTKKCQEHLKLIVDDKYTLKIGKRTLKFIPVP-HWPDSTFTYCP-----EDKILFSNDGFGQHYASRRWADECDV---------SHVMHLFKEY-----------TANILGLFSAQMRKALEVASTVEIKYILSAHGVSWRGDAMGLAIAEYDRWSKGQHCQKKVTVVLDSM............ 266
70 -12.8001e5d_A mol:protein length:402 RUBREDOXIN:OXYGEN OXIDOREDUCTASE  ali model follow..  17  26..YTLSPMGTTYNAYLVEDEKTTLFDTVKAEYKGELLCGIASDPKKIDYLVIQHLELDHAGALPALIEACQPEKIFTSSLGQKAMEQVVKHGETLSLGKRTVTFYETR-HWPDSMVSWFA-----DEKVLISNDIF----------GQNIAASERFSD---QIPVHTLERAMREY------YANIVNPYAPQTLKAIETLVGAGVAPEFICPD............................................... 225
71 -12.8002p4z_A mol:protein length:284 Metal-dependent hydrolases of the beta-lactam  ali model follow..  13  4SGSVEVQVLIENHGLSLLLKKGNKEIVVDTGQSENFIKNCGLMGIDVGRIVLTHGHYDHIGGLKGLLERNPEVKIYTHKEILNKKYAMRKGGSFYEKYKNNFVLIDKDAEIEEGFYVRIPDKFLDEVFVVVKEEINVVTGCS---HAGILNILETARNRFGVSYIKSLIGGFHLRGMEEEKVKDIARKIEEYGVKKVLTGHCTGIDEYGFLKSVLKDK.......................................... 266
72 -12.8001ycf_A mol:protein length:398 Nitric oxide reductase  ali model follow..  17  27..AFSTHRGTTYNAYLIVDDKTALVDTVYEPFKEELIAKLKQDPVKLDYLVVNHTESDHAGAFPAIMELCPDAHVLCTQRAFDSLKTIVKTGTSVSLGKRSLTFIEAP-HWPDSMFTYVP-----EEALLLPNDAFGQHIASVRFDDQVDA---------GLIMDEAAKY-----------YANILMPFSNLITKKLDEIQKINLAIKTIAPS............................................... 226
73 -12.5004d02_A mol:protein length:479 ANAEROBIC NITRIC OXIDE REDUCTASE FLAVORUBREDO  ali model follow..  15  37.............SYLIREEKNVLIDTVDHKFSREFVQNLRNDLADIDYIVINHAEEDHAGALTELMAQIPDTPIYCTANAIDSINNVVKTGDTLDIGGKQLIFVETP-HWPDSMMTYLT-----GDAVLFSNDAFGQHYCEHLFNDEVDQ---------TELFEQCQRY-----------YANILTPFSRLVTPKITEILGFNLPVDMIATS-------HGVVWRDNPTQIVEL......................... 237
74 -12.2001zkp_A mol:protein length:268 hypothetical protein BA1088  ali model follow..  16  40..............YLFEHDGFR--LLVDCGSG--VLAQLQKY-SDIDAVVLSHYHHDHVADIGVLQGQLPELPIYGHTFDENGFHIPYNPEETLQIGPFSISFLKTV-HP---VTCFAMRITAGNDIVVYSADSSYIPEFIPFTKDADLFICEC-----NMYAHQEAAKAGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTEAK.................................................. 244
75 -12.1002ohh_A mol:protein length:404 Type A flavoprotein fprA  ali model follow..  14  37.............AYLVCGDE--GVALIDNSYPGTFDELMARVE-RVDYIIQNHVEKDHSGVLVELHRRFPEAPIYCTEVAVKGLLMTVKTGDVLDLGGKTLTFLETP-HWPDSMFTLLD-----EDGILFSNDAFLMDAARKFYANLITPLSKLVLKKFDEVPSHGQIWTDPMKIIEAYTGWATGMVDERVTVIYDTMHGSTRKMAHAIAEGAMSEGVDVRVY----------CLHEDDRSEIVKDILESG........ 309

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Alexey M. Eroshkin, Andrew LeBlanc, Dana Weekes, Kai Post, Zhanwen Li, Akhil Rajput, Sal T. Butera, Dennis R. Burton, Adam Godzik. bNAber: database of broadly neutralizing HIV antibodies. Nucl. Acids Res. 2013; published on November 7, 2013.

Igarashi Y, Eroshkin A, Gramatikova S, Gramatikoff K, Zhang Y, Smith JW,Osterman AL, Godzik A. CutDB: a proteolytic event database. Nucleic Acids Res. 2007 Jan;35(Database issue):D546-9. Epub 2006 Nov 16.